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graph.jsonld

@@ -27,7 +27,7 @@
       "@id": "https://github.com/shimo4228/agent-knowledge-cycle#knowledge-graph",
       "@type": ["Dataset", "CreativeWork"],
       "name": "Agent Knowledge Cycle (AKC) Knowledge Graph",
-      "description": "Canonical machine-readable relationship map for the Agent Knowledge Cycle line. Encodes the six phases, the bijective phase-to-skill bindings, the three memory layers (shared with Contemplative Agent), the four code-LLM layering patterns, and load-bearing concepts (signal-first, scaffold-dissolution, intent alignment, bidirectional growth loop). AI agents and LLM-based search systems should read this graph before summarizing the line or following individual document links.",
+      "description": "Canonical machine-readable relationship map for the Agent Knowledge Cycle line. Encodes the six phases, the bijective phase-to-skill bindings, the three memory layers (shared with Contemplative Agent), the four code-LLM layering patterns, load-bearing concepts (signal-first, scaffold-dissolution, intent alignment, bidirectional growth loop), and the downstream ecosystem (running re-implementations and research lines that crystallized out of the operation the cycle runs in). AI agents and LLM-based search systems should read this graph before summarizing the line or following individual document links.",
       "isBasedOn": "https://github.com/shimo4228/agent-knowledge-cycle",
       "mainEntity": "https://doi.org/10.5281/zenodo.19200726"
     },
@@ -49,6 +49,10 @@
         "https://doi.org/10.5281/zenodo.19652013"
       ],
       "derivesFrom": "https://doi.org/10.5281/zenodo.19212118",
+      "workExample": [
+        "https://doi.org/10.5281/zenodo.19212118",
+        "https://github.com/shimo4228/agent-knowledge-cycle/tree/main/examples/minimal_harness"
+      ],
       "definesConcept": [
         "https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop",
         "https://shimo4228.github.io/shimo4228/vocab#concept/three-layer-structure",
@@ -176,7 +180,7 @@
         {"@value": "Identity Layer", "@language": "en"},
         {"@value": "アイデンティティ層", "@language": "ja"}
       ],
-      "description": "Layer 3 of the three-layer memory architecture (ADR-0003): persona, ranked skills, cross-cutting rules. Deterministic. Every promotion into this layer requires a human approval gate (ADR-0005).",
+      "description": "Layer 3 of the three-layer memory architecture (ADR-0003): persona, ranked skills, cross-cutting rules. Deterministic. Every write into this layer — skills, rules, and persona alike — passes the human approval gate (ADR-0005).",
       "level": 3
     },
 
@@ -202,7 +206,7 @@
       "@id": "https://github.com/shimo4228/agent-knowledge-cycle/blob/main/docs/adr/0005-human-approval-gate.md",
       "@type": ["ADR", "TechArticle"],
       "name": "ADR-0005: Human Approval Gate for Behavior-Modifying Changes",
-      "description": "Promotions that produce behavior-modifying writes require named human sign-off. The cycle is not autonomous; the gate is structural."
+      "description": "Every change that modifies future agent behavior — skills, rules, identity — requires named human sign-off. The cycle is not autonomous; the gate is structural."
     },
     {
       "@id": "https://github.com/shimo4228/agent-knowledge-cycle/blob/main/docs/adr/0008-code-and-llm-collaboration.md",
@@ -264,6 +268,12 @@
       "name": "ADR-0017: Harness Alignment and Harness Drift",
       "description": "Establishes two terms by derivation from established literature rather than fresh coinage — the second positioning ADR after ADR-0013, applied to the software-evolution and alignment literatures. Harness alignment: the continuous, human-gated activity of keeping an agent's harness (skills, rules, prompts, documentation) aligned with the operator's evolving intent — extends intent alignment (Christiano 2018) to the configuration layer and across time (cf. Lehman's Law of Continuing Change, 1980). Harness drift: the failure mode, in lineage with architectural drift (Perry & Wolf 1992), practical drift (Snook 2000), and agent drift (arXiv:2601.04170). Contrast: autonomous, score-driven harness optimization (Meta-Harness, arXiv:2603.28052). Also records the verified vocabulary gap: the 2026 agent-drift literature does not cite the classical software-evolution lineage."
     },
+    {
+      "@id": "https://github.com/shimo4228/agent-knowledge-cycle/blob/main/docs/adr/0018-record-downstream-applications-as-first-class-context.md",
+      "@type": ["ADR", "TechArticle"],
+      "name": "ADR-0018: Record Downstream Applications as First-Class Context",
+      "description": "The start-of-program repository did not know its own downstream: Contemplative Agent's description was past-direction only (upstream substrate), and four DOI-registered downstream repositories were unmentioned — surfaced as observed pain when the position paper could not cite AKC as its own primary source. Records the corrective: downstream applications are first-class context. Contemplative Agent's role is two-way (substrate for ADR-0002–0005 and operational re-implementation running the six-phase cycle over its own episode logs, every promotion human-gated, demonstration ongoing); crystallized research lines are recorded with relationship facts and DOIs only, importing no downstream content (mechanism-only rule preserved). Itself the record of a Maintain-phase execution on the repository's own self-description."
+    },
 
     {
       "@id": "https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop",
@@ -371,7 +381,7 @@
       "@id": "https://shimo4228.github.io/shimo4228/vocab#akc/concept/human-approval-gate",
       "@type": ["Concept", "DefinedTerm"],
       "name": "human approval gate",
-      "description": "Structural checkpoint for behavior-modifying writes. AKC is not autonomous; promotion across layers requires named human sign-off. Codified as ADR-0005.",
+      "description": "Structural checkpoint for behavior-modifying writes. AKC is not autonomous; every change to the artifacts that shape future behavior — skills, rules, identity — requires named human sign-off. Codified as ADR-0005.",
       "groundedIn": "https://github.com/shimo4228/agent-knowledge-cycle/blob/main/docs/adr/0005-human-approval-gate.md"
     },
     {
@@ -497,10 +507,11 @@
         {"@value": "Contemplative Agent", "@language": "en"},
         {"@value": "コンテンプレイティブ・エージェント", "@language": "ja"}
       ],
-      "description": "Upstream engineering substrate from which AKC's ADR-0002 through ADR-0005 were adapted (three-layer memory, two-stage distill pipeline, immutable episode log, human approval gate). Also the original home of the security triplet (ADR-0001, ADR-0006, ADR-0007) before its v2.0.0 extraction to Agent Attribution Practice. AKC = cycle (mechanism); Contemplative Agent = implementation substrate.",
+      "description": "Sibling research line with a two-way relationship to AKC. Upstream: AKC's ADR-0002 through ADR-0005 were adapted from its engineering substrate (three-layer memory, two-stage distill pipeline, immutable episode log, human approval gate), and it was the original home of the security triplet (ADR-0001, ADR-0006, ADR-0007) before the v2.0.0 extraction to Agent Attribution Practice. Downstream: it is the operational re-implementation of AKC in the autonomous-agent context — its pipeline maps the six phases onto code, the agent runs the six-phase cycle over its own episode logs with no fine-tuning and no labeled training data, and every promotion passes through a human approval gate. The demonstration is ongoing. AKC = cycle (mechanism); Contemplative Agent = implementation substrate and running re-implementation.",
       "identifier": "10.5281/zenodo.19212118",
       "url": "https://github.com/shimo4228/contemplative-agent",
       "author": "https://orcid.org/0009-0002-6168-4162",
+      "implements": "https://shimo4228.github.io/shimo4228/vocab#concept/six-phase-loop",
       "siblingOf": [
         "https://doi.org/10.5281/zenodo.19200726",
         "https://doi.org/10.5281/zenodo.19652013"
@@ -525,6 +536,80 @@
       "derivesFrom": "https://doi.org/10.5281/zenodo.19212118"
     },
 
+    {
+      "@id": "https://doi.org/10.5281/zenodo.20263316",
+      "@type": ["ResearchLine", "ScholarlyArticle"],
+      "name": "Authorship Strategy",
+      "description": "Downstream research line that crystallized out of the same daily operation the cycle runs in. A normative framework, tactical catalog, and empirical baseline for authorship under AI-mediated diffusion. Its own framing of the relationship: AKC defines how knowledge cycles inside the operator-agent pair; authorship-strategy addresses how the cycle's outputs diffuse outside it (mechanism sibling).",
+      "identifier": "10.5281/zenodo.20263316",
+      "url": "https://github.com/shimo4228/authorship-strategy",
+      "author": "https://orcid.org/0009-0002-6168-4162",
+      "derivesFrom": "https://doi.org/10.5281/zenodo.19200726",
+      "siblingOf": "https://doi.org/10.5281/zenodo.19200726"
+    },
+    {
+      "@id": "https://doi.org/10.5281/zenodo.20262112",
+      "@type": ["ResearchLine", "ScholarlyArticle"],
+      "name": "Attention, Not Self",
+      "description": "Sibling research line in the same research program: Buddhist Abhidharma meets computational phenomenology. Its deposit metadata references AKC's concept DOI; the line federates with AKC, Contemplative Agent, and AAP at the research-program level.",
+      "identifier": "10.5281/zenodo.20262112",
+      "url": "https://github.com/shimo4228/attention-not-self",
+      "author": "https://orcid.org/0009-0002-6168-4162",
+      "siblingOf": "https://doi.org/10.5281/zenodo.19200726"
+    },
+    {
+      "@id": "https://doi.org/10.5281/zenodo.20337008",
+      "@type": ["EcosystemRepo", "Dataset"],
+      "name": "doctrine-corpus",
+      "description": "Downstream judgment corpus: a bilingual (EN + JA) judgment-eliciting Q&A dataset encoding the documented judgment of the research program for LLM-mediated diffusion. AKC is one of its four source lines — ADRs and glossary harvested into the corpus. Operational form of Authorship Strategy Layer 4 tactic 7 (LLM-first ingest).",
+      "identifier": "10.5281/zenodo.20337008",
+      "url": "https://github.com/shimo4228/doctrine-corpus",
+      "author": "https://orcid.org/0009-0002-6168-4162",
+      "derivesFrom": "https://doi.org/10.5281/zenodo.19200726"
+    },
+    {
+      "@id": "https://doi.org/10.5281/zenodo.20558800",
+      "@type": ["EcosystemRepo", "ScholarlyArticle"],
+      "name": "existence-proof",
+      "description": "Pre-line working repository (by its own status discipline, not yet a research line): an empowerment doctrine for credential-less AI-enabled creators. Complement of Authorship Strategy — same infrastructure, different payload and beneficiary. Listed as program context; carries no direct AKC reference.",
+      "identifier": "10.5281/zenodo.20558800",
+      "url": "https://github.com/shimo4228/existence-proof",
+      "author": "https://orcid.org/0009-0002-6168-4162",
+      "derivesFrom": "https://doi.org/10.5281/zenodo.20263316"
+    },
+    {
+      "@id": "https://github.com/shimo4228/claude-harness",
+      "@type": ["EcosystemRepo", "SoftwareSourceCode"],
+      "name": "claude-harness",
+      "description": "Bundled distribution of the author's Claude Code harness. Ships the six AKC cycle skills together — its README states they 'are components of the Agent Knowledge Cycle' — so the harness can be read end-to-end. Each skill is also published as its own standalone repo.",
+      "url": "https://github.com/shimo4228/claude-harness",
+      "extends": "https://doi.org/10.5281/zenodo.19200726"
+    },
+    {
+      "@id": "https://github.com/shimo4228/akc-mcp",
+      "@type": ["EcosystemRepo", "SoftwareSourceCode"],
+      "name": "AKC MCP",
+      "description": "MCP (Model Context Protocol) server providing Agent Knowledge Cycle cognitive tools — memory distillation, identity evolution, skill extraction — as a standalone server any AI agent can plug into. Born from the Contemplative Agent framework; re-implements its cognitive layer behind the MCP interface. A third encoding of the cycle's operations alongside the Markdown skills and Contemplative Agent's code pipeline.",
+      "url": "https://github.com/shimo4228/akc-mcp",
+      "extends": "https://doi.org/10.5281/zenodo.19200726",
+      "derivesFrom": "https://doi.org/10.5281/zenodo.19212118"
+    },
+    {
+      "@id": "https://github.com/shimo4228/claude-skill-daily-research",
+      "@type": ["EcosystemRepo", "SoftwareSourceCode"],
+      "name": "daily-research",
+      "description": "Pre-AKC ancestor of the Research phase: the author's daily signal-first research pipeline, skillified in April 2026. Documented as implementation history in docs/inspiration.md.",
+      "url": "https://github.com/shimo4228/claude-skill-daily-research",
+      "groundedIn": "https://github.com/shimo4228/agent-knowledge-cycle/blob/main/docs/inspiration.md"
+    },
+    {
+      "@id": "https://github.com/shimo4228/shimo4228",
+      "@type": "EcosystemRepo",
+      "name": "research-program hub",
+      "description": "Hub repository of the shimo4228 research program; its graph.jsonld is the canonical relationship map of the research ecosystem, federating AKC with its sibling and downstream lines.",
+      "url": "https://github.com/shimo4228/shimo4228"
+    },
+
     {
       "@id": "https://shimo4228.github.io/shimo4228/vocab#prior-art/coala",
       "@type": "ScholarlyArticle",