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InSilicoControl

144 kB

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3 contributors

History: 30 commits

Halper-Stromberg

Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes

6a503f7 18 days ago

.streamlit
Add interactive IGV.js variant browser and static serving configuration about 2 months ago
src
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes 18 days ago
.gitattributes

1.52 kB
Duplicate from streamlit/streamlit-template-space 2 months ago
.gitignore

301 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download about 2 months ago
Dockerfile

487 Bytes
Update Dockerfile to copy .streamlit config and update src/ files with customized app code about 2 months ago
README.md

426 Bytes
initial commit 2 months ago
missing_to_bed.py

991 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download about 2 months ago
packages.txt

17 Bytes
Create packages.txt 2 months ago
pipeline.py

23.7 kB
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes 18 days ago
requirements.txt

58 Bytes
Update requirements.txt 2 months ago
streamlit_app.py

46.1 kB
Add Batch Controls Mode supporting fixed variant coordinates and customizable variant types, VAF, and indel sizes 18 days ago
test_streamlit_bed.py

788 Bytes
Support loading MANE transcripts in igv.js, add toggles for CDS/intron/off-target variants, and add MANE transcripts download about 2 months ago